COWBAT Installation
Dependencies
- Linux system
- Conda
Conda method
The way I install conda:
wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
bash miniconda.sh -b -p $HOME/miniconda
export PATH="$HOME/miniconda/bin:$PATH"
conda config --set always_yes yes
conda update -q conda
The easiest way to install GeneSeekr is to download the source code GitHub Link
git clone https://github.com/OLC-Bioinformatics/GeneSeekr.git
cd GeneSeekr
export PATH="/path/to/repository/GeneSeekr:$PATH"
conda env create -f environment.yml
source activate geneseekr